Bibliography

L. Zhu, N. Kurt, L. Choi, L.J. Lapidus, S. Cavagnero, Sub-millisecond Chain Collapse of the Escherichia coli Globin ApoHmpH. 117 (26) p. 7868-7877 (2013).

L. Wu, L.J. Lapidus, Combining Ultrarapid Mixing with Photochemical Oxidation to Probe Protein Folding, Analytical Chemistry. 85 (10) p. 4920-4924 (2013).

L. J. Lapidus, Exploring the Top of Protein Folding Funnel by Experiment, Current Opinion in Structural Biology. 23 p. 30-35 (2013).

L.J. Lapidus, Understanding Protein Aggregation from the View of Monomer Dynamics, Molecular Biosystems. 9 p. 29-35 (2012).

R. Narayanan, L. Zhu, Y. Velmurugu, J. Roca, S.V. Kuznetsov, G. Prehna, L.J. Lapidus, A. Ansari, Exploring the Energy Landscape of Nucleic Acid Hairpins using Laser Temperature-Jump and Microfluidic Mixing, Journal of the American Chemical Society. 134 (46) p. 18952-18963 (2012).

V.A. Voelz, M. Jäger, S. Yao, Y. Chen, L. Zhu, S.A. Waldauer, G.R. Bowman, M. Friedrichs, O. Bakajin, L.J. Lapidus, S. Weiss, V.S. Pande,   Slow Unfolded-State Structuring in Acyl-CoA Binding Protein Folding Revealed by Simulation and Experiment, Journal of the American Chemical Society 134 (30) p. 12565–12577 (2012).

B. Ahmad, L.J. Lapidus, Curcumin Prevents a-synuclein Aggregation by Controlling Intramolecular Diffusion, Journal of Biological Chemistry 287(12): p. 9193-9199 (2012).

B. Ahmad, Y. Chen, L.J. Lapidus, Aggregation of a-synuclein is Kinetically Controlled by Intramolecular Diffusion, Proceedings of the National Academy of Sciences. 109(7): p. 2336-2341(2012).

S. A. Waldauer, L. Wu, S. Yao, O. Bakajin, L.J. Lapidus, Microfluidic Mixers for Studying Protein Folding, Journal of Visualized Experiments(62): p. e3976.(2012).

L. Zhu, K. Ghosh, M. King, T. Cellmer, O. Bakajin, L.J. Lapidus, Evidence of Multiple Folding Pathways for the Villin Headpiece Subdomain. J. Phys Chem B. 115, 12632-12637 (2011).

Y. Chen, W.J. Wedemeyer, L.J. Lapidus, A General Model of Unfolded Proteins under Folding Conditions. J. Phys. Chem. B. 114, 15969-15975 (2010). 

S. A. Waladauer, O. Bakajin, L.J. Lapidus, Extremely Slow Intramolecular Diffusion in Unfolded Protein L, Proceedings of the National Academy of Sciences 107, 13713-13717 (2010).

V.A. Voelz, V.R. Singh, W.J. Wedemeyer, L.J. Lapidus, V.S. Pande, Unfolded state dynamics and structure of protein L characterized by simulation and experiment.  Journal of the American Chemical Society, 132, 4702-4709 (2010).

Y. Chen, C. Parrini, N. Taddei, L.J. Lapidus, Conformational Properties of Unfolded HypF-N, J. Phys. Chem. B 113, 16209-16213 (2009).

S. DeCamp, S.A. Waldauer, A. Naganathan, O. Bakajin, L.J. Lapidus, Direct Observation of Downhill folding of l-repressor in a Microfluidic Mixer, Biophys. J. 97, 1772-1777 (2009).

R. Saravana, E. Slabuagh, V.R. Singh, L.J. Lapidus, T. Haas, F. Brandizzi, The targeting of the oxysterol-binding protein ORP3a to the endoplamic reticulum relies on the plant VAP33 homolog PVA12, The Plant Journal, 58, 817-830 (2009).

S. Waldauer, O. Bakajin, T. Ball, Y. Chen, S. DeCamp, M. Kopka, M. Jäger, V.R. Singh, W.J. Wedemeyer, S. Weiss, S. Yao, L.J. Lapidus, Ruggedness in the Folding Landscape of Protein L, HFSP Journal, 2, 388-395 (2008).

V.R. Singh, L.J. Lapidus, The Intrinsic Stiffness of Polyglutamine Peptides. Journal of Physical Chemistry B, 112, 13172-13176 (2008)

V.R. Singh, M. Kopka, Y. Chen, W.S. Wedemeyer, L.J. Lapidus, Dynamic Similarity of the Unfolded States of Proteins L and G. Biochemistry, 46, 10046-10054 (2007).

L.J. Lapidus, S. Yao, K. McGarrity, D. Hertzog, E. Tubman, O. Bakajin, Protein Hydrophobic Collapse and Early Folding Steps Observed in a Microfluidic Mixer Biophys. J. 93, 218-224 (2007).

T. H. Lee, L. J. Lapidus, W. Zhao, K. J. Travers, D. Herschlag, and S. Chu, Measuring the Folding Transition Time of Single RNA Molecules. Biophys. J. 92, 3275-3283 (2007).

M. Buscaglia, L.J. Lapidus, W.A. Eaton, and J. Hofrichter, Effects of Denaturants on the Dynamics of Loop Formation in Polypeptides. Biophys. J., 2006. 91: p. 276-288.

M. Sadqi, L.J. Lapidus, V. Muñoz, How fast is protein hydrophobic collapse? PNAS USA 100, 12117-12122 (2003).

M. Buscaglia, B. Schuler, L. J. Lapidus, W.A. Eaton, J. Hofrichter, Kinetics of intramolecular contact formation in a denatured protein. J. Mol. Biol. 332, 9-12(2003).

L.J. Lapidus, P.J. Steinbach, W.A. Eaton, A. Szabo and J. Hofrichter, Effects of chain stiffness on the dynamics of loop formation in polypeptides. Appendix: Testing a 1-dimensional diffusion model for peptide dynamics.  J. Phys. Chem.B 106, 11628 (2002).

L.J. Lapidus, W.A. Eaton and J. Hofrichter, Measuring dynamic flexibility of the coil state of a helix-forming peptideJ. Mol. Biol. 319, 19 (2002).

L.J. Lapidus, W.A. Eaton and J. Hofrichter, Dynamics of intramolecular contact formation in polypeptides: distance dependence of quenching rates in a room-temperature glass. Phys. Rev. Lett. 87, 8101 (2001).

L.J. Lapidus, W.A. Eaton and J. Hofrichter, Measuring the rate of intramolecular contact formation in polypeptidesPNAS USA 97, 7220 (2000).

W.A. Eaton, V. Muñoz, S.J. Hagen, G.S. Jas, L.J. Lapidus, E.R. Henry, J. Hofrichter, Fast Kinetics and Mechanisms in Protein Folding. Ann. Rev. Biophys. Biomol. Struct. 29, 327-359 (2000).

J. Hofrichter, P.A. Thompson, V. Muñoz, G.S. Jas, E. Henry, S. Hagen, L.J. Lapidus, W.A. Eaton, Dynamics of a-Helices, b-Hairpins and Loops.  In Old and New Views of Protein Folding edited by K. Kuwajuma and M. Arai, Elsevier Science B.V., pp. 53-62 (1999).

L.J. Lapidus, D. Enzer and G. Gabrielse, Stochastic Phase-Switching of a Single Parametrically Excited Electron in a Penning TrapPhys Rev. Lett. 83, 889 (1998).

R.S. Conti, S. Hatamian, L. Lapidus, A. Rich, M. Skalsey, Search for C-violating, P-conserving Interactions and Observation of 23S1 to 21P1 Transitions in Positronium. Phys. Lett. A. 177, 43-48 (1993).

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